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Description : Uncharacterized protein At2g23090 OS=Arabidopsis thaliana (sp|o64818|y2309_arath : 97.8)
Gene families : OG0006400 (Archaeplastida) Phylogenetic Tree(s): OG0006400_tree ,
OG_05_0008542 (LandPlants) Phylogenetic Tree(s): OG_05_0008542_tree ,
OG_06_0010226 (SeedPlants) Phylogenetic Tree(s): OG_06_0010226_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g064730.3.1 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G23090 | No alias | Uncharacterised protein family SERF | 0.03 | Archaeplastida | |
| GSVIVT01000150001 | No alias | Uncharacterized protein At2g23090 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Gb_03649 | No alias | Uncharacterized protein At2g23090 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| LOC_Os07g02340.1 | No alias | Uncharacterized protein At2g23090 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Mp6g10910.1 | No alias | Uncharacterized protein At2g23090 OS=Arabidopsis... | 0.05 | Archaeplastida | |
| Pp3c13_8710V3.1 | No alias | Uncharacterised protein family SERF | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000045 | autophagosome assembly | IEP | Neighborhood |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007033 | vacuole organization | IEP | Neighborhood |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016093 | polyprenol metabolic process | IEP | Neighborhood |
| BP | GO:0019348 | dolichol metabolic process | IEP | Neighborhood |
| CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
| BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Neighborhood |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Neighborhood |
| CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0034227 | tRNA thio-modification | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051382 | kinetochore assembly | IEP | Neighborhood |
| BP | GO:0051383 | kinetochore organization | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| CC | GO:0070469 | respiratory chain | IEP | Neighborhood |
| BP | GO:0070925 | organelle assembly | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| BP | GO:1905037 | autophagosome organization | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007513 | Uncharacterised_SERF | 3 | 36 |
| No external refs found! |