Solyc02g064960.3.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g064960.3.1
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00035p00205430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Gb_11937	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.02	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g39110.2	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.01	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Zm00001e038652_P002	No alias	transcription factor (AP2)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	254	304
IPR001471	AP2/ERF_dom	162	211

External Links

No external refs found!

Solyc02g064960.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation