1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g066905.1.1

Solyc02g066905.1.1


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g066905.1.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00036030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
GSVIVT01008104001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
LOC_Os01g68820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g41160.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Pp3c1_21920V3.1 No alias novel interactor of JAZ 0.03 Archaeplastida
Solyc01g059780.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 79 115
No external refs found!