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  5. Solyc02g067390.3.1

Solyc02g067390.3.1


Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana (sp|q9lfd5|bpa1_arath : 112.0)


Gene families : OG0000598 (Archaeplastida) Phylogenetic Tree(s): OG0000598_tree ,
OG_05_0008563 (LandPlants) Phylogenetic Tree(s): OG_05_0008563_tree ,
OG_06_0005781 (SeedPlants) Phylogenetic Tree(s): OG_06_0005781_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067390.3.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01022464001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g50560.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g02240.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c23_20750V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 73
No external refs found!