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  5. Solyc02g067420.3.1

Solyc02g067420.3.1


Description : ubiquitin-conjugating E2 protein


Gene families : OG0000900 (Archaeplastida) Phylogenetic Tree(s): OG0000900_tree ,
OG_05_0002020 (LandPlants) Phylogenetic Tree(s): OG_05_0002020_tree ,
OG_06_0002099 (SeedPlants) Phylogenetic Tree(s): OG_06_0002099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067420.3.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AT1G14400 ATUBC1, UBC1 ubiquitin carrier protein 1 0.04 Archaeplastida
AT2G02760 ATUBC2, UBC2 ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Cpa|evm.model.tig00000737.3 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre06.g294850 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020056001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01022467001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_26842 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
LOC_Os07g07240.1 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Pp3c12_9550V3.1 No alias ubiquiting-conjugating enzyme 2 0.04 Archaeplastida
Zm00001e011475_P001 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Zm00001e032886_P001 No alias ubiquitin-conjugating E2 protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!