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  5. Solyc02g067640.3.1

Solyc02g067640.3.1


Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 479.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 242.1)


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0001044 (LandPlants) Phylogenetic Tree(s): OG_05_0001044_tree ,
OG_06_0000479 (SeedPlants) Phylogenetic Tree(s): OG_06_0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067640.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00198650 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00074p00182020 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00085p00112760 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 Archaeplastida
AMTR_s00096p00099360 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00096p00105250 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G02460 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
AT1G05660 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G65570 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G80170 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 Archaeplastida
AT2G43880 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G43890 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G26610 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT4G01890 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01004006001 No alias Polygalacturonase OS=Prunus persica 0.02 Archaeplastida
GSVIVT01004007001 No alias Polygalacturonase OS=Prunus persica 0.03 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.03 Archaeplastida
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.06 Archaeplastida
GSVIVT01017302001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032114001 No alias Polygalacturonase OS=Actinidia deliciosa 0.05 Archaeplastida
GSVIVT01032117001 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
GSVIVT01033303001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01038243001 No alias Polygalacturonase OS=Prunus persica 0.03 Archaeplastida
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.06 Archaeplastida
Gb_12018 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Gb_33196 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
LOC_Os01g43490.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
LOC_Os03g11760.1 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
LOC_Os03g59330.1 No alias polygalacturonase (QRT2) 0.05 Archaeplastida
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g46520.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g50260.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g14410.1 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
MA_101764g0010 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10862g0010 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 Archaeplastida
MA_63122g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 Archaeplastida
MA_754919g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.04 Archaeplastida
MA_9231294g0010 No alias No annotation 0.04 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
Solyc04g025440.3.1 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g009420.3.1 No alias Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g019180.2.1 No alias Polygalacturonase OS=Prunus persica... 0.05 Archaeplastida
Solyc12g019220.1.1 No alias Polygalacturonase OS=Prunus persica... 0.04 Archaeplastida
Zm00001e017465_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e019002_P001 No alias Polygalacturonase OS=Prunus persica... 0.03 Archaeplastida
Zm00001e026160_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026600_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 50 376
No external refs found!