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  5. Solyc02g067800.4.1

Solyc02g067800.4.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067800.4.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 Archaeplastida
GSVIVT01003548001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01025128001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.08 Archaeplastida
GSVIVT01032415001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
Gb_19390 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g07480.2 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_136689g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.02 Archaeplastida
Solyc06g007390.4.1 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 11 107
No external refs found!