Solyc02g067960.3.1


Description : transcription factor (mTERF)


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0013813 (SeedPlants) Phylogenetic Tree(s): OG_06_0013813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067960.3.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AT5G07900 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001304.7 No alias RNA biosynthesis.organelle... 0.01 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.06 Archaeplastida
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.04 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_23054 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os02g51450.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.06 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 63 137
IPR003690 MTERF 123 336
No external refs found!