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Description : polygalacturonase (QRT3)
Gene families : OG0003590 (Archaeplastida) Phylogenetic Tree(s): OG0003590_tree ,
OG_05_0002501 (LandPlants) Phylogenetic Tree(s): OG_05_0002501_tree ,
OG_06_0001950 (SeedPlants) Phylogenetic Tree(s): OG_06_0001950_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g068400.3.1 | |
| Cluster | HCCA: Cluster_201 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00255270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
| AMTR_s00102p00131940 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
| AT4G20050 | QRT3 | Pectin lyase-like superfamily protein | 0.16 | Archaeplastida | |
| GSVIVT01012139001 | No alias | Cell wall.pectin.modification and... | 0.15 | Archaeplastida | |
| LOC_Os04g52320.1 | No alias | polygalacturonase (QRT3) | 0.05 | Archaeplastida | |
| MA_10425986g0010 | No alias | polygalacturonase (QRT3) | 0.03 | Archaeplastida | |
| MA_8818361g0010 | No alias | polygalacturonase (QRT3) | 0.02 | Archaeplastida | |
| MA_917578g0010 | No alias | polygalacturonase (QRT3) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006020 | inositol metabolic process | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Neighborhood |
| MF | GO:0016843 | amine-lyase activity | IEP | Neighborhood |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| BP | GO:0019310 | inositol catabolic process | IEP | Neighborhood |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Neighborhood |
| BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
| BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
| MF | GO:0050113 | inositol oxygenase activity | IEP | Neighborhood |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024535 | Pectate_lyase_SF_prot | 79 | 299 |
| No external refs found! |