1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g068415.1.1

Solyc02g068415.1.1


Description : RING-H2 finger protein ATL73 OS=Arabidopsis thaliana (sp|q9flc6|atl73_arath : 95.9)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g068415.1.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00122930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.05 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.05 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.05 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g33720.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10431161g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_117647g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_129306g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.02 Archaeplastida
Smo412606 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 124 167
No external refs found!