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  5. Solyc02g069480.3.1

Solyc02g069480.3.1


Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_plaac : 323.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 254.5)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g069480.3.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.06 Archaeplastida
LOC_Os08g23790.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 60 382
No external refs found!