Solyc02g072240.3.1

Description : catalytic component CesA of cellulose synthase complex

Gene families : OG0000303 (Archaeplastida) Phylogenetic Tree(s): OG0000303_tree ,
OG_05_0000193 (LandPlants) Phylogenetic Tree(s): OG_05_0000193_tree ,
OG_06_0000126 (SeedPlants) Phylogenetic Tree(s): OG_06_0000126_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g072240.3.1
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00196920	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.16	Archaeplastida
AMTR_s00081p00171100	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
AMTR_s00137p00043990	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.17	Archaeplastida
AMTR_s00170p00012630	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.09	Archaeplastida
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.22	Archaeplastida
AT4G32410	AtCESA1, RSW1, CESA1	cellulose synthase 1	0.03	Archaeplastida
AT5G05170	IXR1, CEV1,...	Cellulose synthase family protein	0.05	Archaeplastida
AT5G09870	CESA5	cellulose synthase 5	0.05	Archaeplastida
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.23	Archaeplastida
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.23	Archaeplastida
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.03	Archaeplastida
GSVIVT01013471001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01021248001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.2	Archaeplastida
GSVIVT01023643001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.19	Archaeplastida
GSVIVT01023837001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01028402001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.19	Archaeplastida
GSVIVT01032096001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01033297001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01034552001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
Gb_04147	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Gb_05828	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Gb_07428	No alias	catalytic component CesA of cellulose synthase complex	0.09	Archaeplastida
Gb_07444	No alias	catalytic component CesA of cellulose synthase complex	0.12	Archaeplastida
Gb_17419	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
Gb_31853	No alias	catalytic component CesA of cellulose synthase complex	0.12	Archaeplastida
Gb_32651	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
LOC_Os01g54620.1	No alias	catalytic component CesA of cellulose synthase complex	0.17	Archaeplastida
LOC_Os03g62090.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os05g08370.1	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
LOC_Os07g10770.1	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
LOC_Os07g14850.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
LOC_Os07g24190.1	No alias	catalytic component CesA of cellulose synthase complex	0.13	Archaeplastida
LOC_Os09g25490.1	No alias	catalytic component CesA of cellulose synthase complex	0.14	Archaeplastida
LOC_Os10g32980.1	No alias	catalytic component CesA of cellulose synthase complex	0.14	Archaeplastida
MA_102060g0010	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
MA_10429177g0010	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
MA_10433465g0030	No alias	Probable cellulose synthase A catalytic subunit 9...	0.02	Archaeplastida
MA_140410g0010	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
MA_174181g0010	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Mp2g07690.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Pp3c15_7150V3.1	No alias	cellulose synthase 1	0.06	Archaeplastida
Pp3c2_13330V3.1	No alias	Cellulose synthase family protein	0.02	Archaeplastida
Pp3c3_34520V3.1	No alias	Cellulose synthase family protein	0.06	Archaeplastida
Pp3c8_7420V3.1	No alias	Cellulose synthase family protein	0.03	Archaeplastida
Pp3c9_2550V3.1	No alias	cellulose synthase 1	0.04	Archaeplastida
Pp3c9_2670V3.1	No alias	Cellulose synthase family protein	0.03	Archaeplastida
Smo141535	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	Archaeplastida
Smo163575	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.09	Archaeplastida
Smo73698	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
Smo75715	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
Solyc01g087210.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Solyc04g071650.4.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Solyc04g072790.2.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Solyc12g056580.2.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e004630_P001	No alias	catalytic component CesA of cellulose synthase complex	0.18	Archaeplastida
Zm00001e006094_P004	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e006290_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e009406_P001	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Zm00001e009570_P001	No alias	catalytic component CesA of cellulose synthase complex	0.09	Archaeplastida
Zm00001e009592_P002	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e009843_P002	No alias	catalytic component CesA of cellulose synthase complex	0.18	Archaeplastida
Zm00001e019828_P001	No alias	catalytic component CesA of cellulose synthase complex	0.16	Archaeplastida
Zm00001e026711_P001	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
Zm00001e031187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
Zm00001e033093_P003	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
Zm00001e033234_P001	No alias	No annotation	0.09	Archaeplastida
Zm00001e033375_P001	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
Zm00001e034187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.17	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005885	Arp2/3 protein complex	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	7	62
IPR005150	Cellulose_synth	250	962

External Links

No external refs found!

Solyc02g072240.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation