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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 524.0)
Gene families : OG0024567 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0023590 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g076700.1.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_452577g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 73 | 101 |
| IPR002885 | Pentatricopeptide_repeat | 137 | 165 |
| IPR002885 | Pentatricopeptide_repeat | 589 | 615 |
| IPR002885 | Pentatricopeptide_repeat | 384 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 104 | 130 |
| IPR002885 | Pentatricopeptide_repeat | 260 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 229 | 258 |
| IPR002885 | Pentatricopeptide_repeat | 198 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 167 | 196 |
| IPR002885 | Pentatricopeptide_repeat | 486 | 509 |
| IPR002885 | Pentatricopeptide_repeat | 42 | 71 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 346 |
| IPR002885 | Pentatricopeptide_repeat | 415 | 444 |
| IPR002885 | Pentatricopeptide_repeat | 514 | 560 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 317 |
| IPR002885 | Pentatricopeptide_repeat | 351 | 379 |
| No external refs found! |