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  4. Sequence
  5. Solyc02g077250.2.1

Solyc02g077250.2.1


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077250.2.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.03 Archaeplastida
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01032911001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Gb_17863 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_30049 No alias transcription factor (TCP) 0.04 Archaeplastida
Gb_36354 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.02 Archaeplastida
Gb_38379 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os01g55750.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os03g49880.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os05g43760.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os08g33530.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os09g24480.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_101752g0020 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_16704g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_35349g0010 No alias transcription factor (TCP) 0.06 Archaeplastida
MA_35349g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.08 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e005407_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e011911_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e012216_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e034097_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 116 208
No external refs found!