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  5. Solyc02g077390.2.1

Solyc02g077390.2.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0001039 (SeedPlants) Phylogenetic Tree(s): OG_06_0001039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077390.2.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00021p00189010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.11 Archaeplastida
AMTR_s00023p00181320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.05 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 Archaeplastida
AT5G46010 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G59340 WOX2 WUSCHEL related homeobox 2 0.05 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01029942001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os01g63510.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os04g56780.1 No alias transcription factor (WOX) 0.05 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.06 Archaeplastida
Zm00001e006644_P002 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.11 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 49 109
No external refs found!