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  5. Solyc02g077590.1.1

Solyc02g077590.1.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077590.1.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G26960 AtHB23, HB23 homeobox protein 23 0.06 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 Archaeplastida
AT3G01220 ATHB20, HB20 homeobox protein 20 0.02 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.05 Archaeplastida
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.03 Archaeplastida
GSVIVT01009083001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_35959 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Gb_39722 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.03 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c16_21410V3.1 No alias homeobox 1 0.03 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc05g051460.3.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e007381_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 16 69
No external refs found!