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  5. Solyc02g078460.3.1

Solyc02g078460.3.1


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree ,
OG_06_0000881 (SeedPlants) Phylogenetic Tree(s): OG_06_0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078460.3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G58787 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
LOC_Os04g58320.2 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
LOC_Os10g30850.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
MA_20567g0010 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Pp3c4_24440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Zm00001e004453_P001 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
Zm00001e004685_P002 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e041948_P002 No alias RING-HC-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!