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  5. Solyc02g079760.3.1

Solyc02g079760.3.1


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079760.3.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AMTR_s00043p00225670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00109p00114170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G61660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01014542001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_26693 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_40387 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g13000.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g17680.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os03g55220.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os04g41570.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os07g28890.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_504223g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Zm00001e007719_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e021661_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!