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  5. Solyc02g079860.1.1

Solyc02g079860.1.1


Description : BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana (sp|q9c5j4|y3210_arath : 317.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0001999 (LandPlants) Phylogenetic Tree(s): OG_05_0001999_tree ,
OG_06_0002247 (SeedPlants) Phylogenetic Tree(s): OG_06_0002247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079860.1.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00177890 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
AMTR_s00144p00020600 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00474 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
LOC_Os04g40100.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_26192g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
MA_448959g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.09 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
Zm00001e035189_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e035388_P001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 190 415
No external refs found!