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  5. Solyc02g079960.3.1

Solyc02g079960.3.1


Description : H-type thioredoxin


Gene families : OG0000190 (Archaeplastida) Phylogenetic Tree(s): OG0000190_tree ,
OG_05_0006721 (LandPlants) Phylogenetic Tree(s): OG_05_0006721_tree ,
OG_06_0004623 (SeedPlants) Phylogenetic Tree(s): OG_06_0004623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079960.3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G42980 ATTRX3, ATTRXH3,... thioredoxin 3 0.03 Archaeplastida
Cre09.g391900 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 Archaeplastida
GSVIVT01007337001 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.04 Archaeplastida
GSVIVT01014587001 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 Archaeplastida
LOC_Os04g53740.1 No alias H-type thioredoxin 0.03 Archaeplastida
Mp5g19690.1 No alias H-type thioredoxin 0.02 Archaeplastida
Zm00001e033006_P001 No alias H-type thioredoxin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 13 113
No external refs found!