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Description : G2-like GARP transcription factor
Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g080860.3.1 | |
| Cluster | HCCA: Cluster_157 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g07170.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| LOC_Os02g46940.1 | No alias | G2-like GARP transcription factor | 0.05 | Archaeplastida | |
| LOC_Os03g03760.1 | No alias | G2-like GARP transcription factor | 0.05 | Archaeplastida | |
| LOC_Os08g06370.1 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| LOC_Os08g33050.1 | No alias | G2-like GARP transcription factor | 0.04 | Archaeplastida | |
| MA_201937g0010 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Mp3g04970.1 | No alias | G2-like GARP transcription factor | 0.02 | Archaeplastida | |
| Pp3c22_8217V3.1 | No alias | Homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c23_19680V3.1 | No alias | Homeodomain-like superfamily protein | 0.02 | Archaeplastida | |
| Solyc04g008480.2.1 | No alias | G2-like GARP transcription factor | 0.03 | Archaeplastida | |
| Zm00001e000237_P002 | No alias | G2-like GARP transcription factor | 0.06 | Archaeplastida | |
| Zm00001e034056_P001 | No alias | G2-like GARP transcription factor | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 45 | 95 |
| No external refs found! |