Solyc02g080990.2.1

Description : leucine-tRNA ligase

Gene families : OG0004918 (Archaeplastida) Phylogenetic Tree(s): OG0004918_tree ,
OG_05_0006347 (LandPlants) Phylogenetic Tree(s): OG_05_0006347_tree ,
OG_06_0007205 (SeedPlants) Phylogenetic Tree(s): OG_06_0007205_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g080990.2.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00043170	evm_27.TU.AmTr_v1...	Leucine--tRNA ligase, chloroplastic/mitochondrial...	0.02	Archaeplastida
AMTR_s00106p00046740	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cpa\|evm.model.tig00000865.51	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
GSVIVT01012668001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	Archaeplastida
Gb_36904	No alias	leucine-tRNA ligase	0.03	Archaeplastida
LOC_Os01g03020.1	No alias	leucine-tRNA ligase	0.07	Archaeplastida
MA_413765g0010	No alias	leucine-tRNA ligase	0.03	Archaeplastida
Mp3g22600.1	No alias	leucine-tRNA ligase	0.05	Archaeplastida
Pp3c7_13710V3.1	No alias	tRNA synthetase class I (I, L, M and V) family protein	0.04	Archaeplastida
Zm00001e025691_P001	No alias	leucine-tRNA ligase	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0004832	valine-tRNA ligase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006298	mismatch repair	IEP	Neighborhood
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	608	637
IPR025709	Leu_tRNA-synth_edit	182	377
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	693	801
IPR015413	Methionyl/Leucyl_tRNA_Synth	2	133

External Links

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Solyc02g080990.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation