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  5. Solyc02g081030.4.1

Solyc02g081030.4.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001075 (LandPlants) Phylogenetic Tree(s): OG_05_0001075_tree ,
OG_06_0010928 (SeedPlants) Phylogenetic Tree(s): OG_06_0010928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g081030.4.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT1G30360 ERD4 Early-responsive to dehydration stress protein (ERD4) 0.08 Archaeplastida
GSVIVT01011464001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.05 Archaeplastida
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Pp3c7_9820V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Pp3c8_3900V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 140 412
IPR027815 PHM7_cyt 5 129
No external refs found!