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  5. AMTR_s00022p00250320

AMTR_s00022p00250320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.382

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00250320
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.04 Archaeplastida
Gb_00745 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_08642 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 Archaeplastida
Gb_08781 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_25978 No alias Ethylene-responsive transcription factor ABI4... 0.02 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_41294 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g11940.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
LOC_Os08g44960.1 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_12671g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_66742g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 29 78
No external refs found!