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  5. Solyc02g081970.4.1

Solyc02g081970.4.1


Description : vacuolar sorting receptor (VSR)


Gene families : OG0000827 (Archaeplastida) Phylogenetic Tree(s): OG0000827_tree ,
OG_05_0000669 (LandPlants) Phylogenetic Tree(s): OG_05_0000669_tree ,
OG_06_0000710 (SeedPlants) Phylogenetic Tree(s): OG_06_0000710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g081970.4.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT2G34940 VSR5, VSR3;2, BP80-3;2 VACUOLAR SORTING RECEPTOR 5 0.04 Archaeplastida
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.03 Archaeplastida
LOC_Os03g21720.1 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
LOC_Os04g52190.1 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
LOC_Os06g45380.1 No alias vacuolar sorting receptor (VSR) 0.05 Archaeplastida
MA_10435197g0020 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida
Mp7g13540.1 No alias vacuolar sorting receptor (VSR) 0.04 Archaeplastida
Pp3c11_3940V3.1 No alias vaculolar sorting receptor 3 0.04 Archaeplastida
Pp3c1_1390V3.1 No alias vacuolar sorting receptor 4 0.03 Archaeplastida
Pp3c4_11280V3.1 No alias vacuolar sorting receptor 4 0.02 Archaeplastida
Smo440462 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 Archaeplastida
Zm00001e038238_P001 No alias vacuolar sorting receptor (VSR) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003137 PA_domain 72 171
No external refs found!