Solyc02g082080.1.1

Description : copper cation channel (COPT). copper transporter (COPT)

Gene families : OG0000928 (Archaeplastida) Phylogenetic Tree(s): OG0000928_tree ,
OG_05_0003161 (LandPlants) Phylogenetic Tree(s): OG_05_0003161_tree ,
OG_06_0008855 (SeedPlants) Phylogenetic Tree(s): OG_06_0008855_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g082080.1.1
Cluster	HCCA: Cluster_258

Target	Alias	Description	ECC score	Gene Family Method
AT2G37925	COPT4	copper transporter 4	0.03	Archaeplastida
GSVIVT01015065001	No alias	Nutrient uptake.copper uptake.reduction-based...	0.05	Archaeplastida
GSVIVT01024838001	No alias	Nutrient uptake.copper uptake.reduction-based...	0.05	Archaeplastida
GSVIVT01024841001	No alias	Nutrient uptake.copper uptake.reduction-based...	0.08	Archaeplastida
GSVIVT01035488001	No alias	Nutrient uptake.copper uptake.reduction-based...	0.07	Archaeplastida
Mp4g11240.1	No alias	copper cation channel (COPT). copper transporter (COPT)	0.02	Archaeplastida
Mp8g07760.1	No alias	copper cation channel (COPT). copper transporter (COPT)	0.02	Archaeplastida
Smo18456	No alias	Nutrient uptake.copper uptake.reduction-based...	0.03	Archaeplastida
Zm00001e009889_P001	No alias	copper cation channel (COPT). copper transporter (COPT)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
CC	GO:0044425	membrane part	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009522	photosystem I	IEP	Neighborhood
CC	GO:0009538	photosystem I reaction center	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	4	132

External Links

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Solyc02g082080.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation