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  5. Solyc02g082540.4.1

Solyc02g082540.4.1


Description : component EH of TPLATE AP-2 co-adaptor complex


Gene families : OG0001931 (Archaeplastida) Phylogenetic Tree(s): OG0001931_tree ,
OG_05_0001865 (LandPlants) Phylogenetic Tree(s): OG_05_0001865_tree ,
OG_06_0002613 (SeedPlants) Phylogenetic Tree(s): OG_06_0002613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g082540.4.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00148910 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
AT1G20760 No alias Calcium-binding EF hand family protein 0.03 Archaeplastida
GSVIVT01013392001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
GSVIVT01023872001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
LOC_Os03g03830.1 No alias component EH of TPLATE AP-2 co-adaptor complex 0.02 Archaeplastida
LOC_Os06g51250.1 No alias component EH of TPLATE AP-2 co-adaptor complex 0.03 Archaeplastida
MA_10434216g0010 No alias component EH of TPLATE AP-2 co-adaptor complex 0.03 Archaeplastida
MA_93279g0010 No alias No annotation 0.03 Archaeplastida
Pp3c13_24530V3.1 No alias Calcium-binding EF hand family protein 0.04 Archaeplastida
Pp3c26_230V3.1 No alias Calcium-binding EF hand family protein 0.04 Archaeplastida
Zm00001e000245_P004 No alias component EH of TPLATE AP-2 co-adaptor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000261 EH_dom 343 432
IPR002048 EF_hand_dom 11 26
No external refs found!