Description : Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana (sp|q84j71|pp161_arath : 528.0)

Gene families : OG0015410 (Archaeplastida) Phylogenetic Tree(s): OG0015410_tree ,
OG_05_0015253 (LandPlants) Phylogenetic Tree(s): OG_05_0015253_tree ,
OG_06_0014935 (SeedPlants) Phylogenetic Tree(s): OG_06_0014935_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc02g082970.1.1
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AT2G17670 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0042274 ribosomal small subunit biogenesis IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 248
IPR002885 Pentatricopeptide_repeat 269 318
IPR002885 Pentatricopeptide_repeat 339 388
IPR002885 Pentatricopeptide_repeat 411 435
No external refs found!