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  5. Solyc02g083160.3.1

Solyc02g083160.3.1


Description : GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana (sp|q8lb81|gdl79_arath : 205.0)


Gene families : OG0000013 (Archaeplastida) Phylogenetic Tree(s): OG0000013_tree ,
OG_05_0002410 (LandPlants) Phylogenetic Tree(s): OG_05_0002410_tree ,
OG_06_0001589 (SeedPlants) Phylogenetic Tree(s): OG_06_0001589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083160.3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00130000 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_14207g0010 No alias GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 39 341
No external refs found!