Solyc02g083350.4.1


Description : DNA-directed RNA polymerase II subunit 1 OS=Arabidopsis thaliana (sp|p18616|nrpb1_arath : 395.0)


Gene families : OG0017749 (Archaeplastida) Phylogenetic Tree(s): OG0017749_tree ,
OG_05_0017561 (LandPlants) Phylogenetic Tree(s): OG_05_0017561_tree ,
OG_06_0017056 (SeedPlants) Phylogenetic Tree(s): OG_06_0017056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083350.4.1
Cluster HCCA: Cluster_131


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
BP GO:0006366 transcription by RNA polymerase II IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000684 RNA_pol_II_repeat_euk 249 262
IPR000684 RNA_pol_II_repeat_euk 221 234
IPR000684 RNA_pol_II_repeat_euk 228 241
IPR000684 RNA_pol_II_repeat_euk 319 332
IPR000684 RNA_pol_II_repeat_euk 298 311
IPR000684 RNA_pol_II_repeat_euk 284 297
IPR000684 RNA_pol_II_repeat_euk 242 255
IPR000684 RNA_pol_II_repeat_euk 305 318
IPR000684 RNA_pol_II_repeat_euk 235 248
IPR000684 RNA_pol_II_repeat_euk 389 402
IPR000684 RNA_pol_II_repeat_euk 333 346
IPR000684 RNA_pol_II_repeat_euk 256 269
IPR000684 RNA_pol_II_repeat_euk 449 462
IPR000684 RNA_pol_II_repeat_euk 263 276
IPR000684 RNA_pol_II_repeat_euk 270 283
IPR000684 RNA_pol_II_repeat_euk 354 367
IPR000684 RNA_pol_II_repeat_euk 375 388
IPR000684 RNA_pol_II_repeat_euk 326 339
IPR000684 RNA_pol_II_repeat_euk 368 381
IPR000684 RNA_pol_II_repeat_euk 361 374
IPR000684 RNA_pol_II_repeat_euk 347 360
IPR000684 RNA_pol_II_repeat_euk 277 290
IPR000684 RNA_pol_II_repeat_euk 396 409
IPR000684 RNA_pol_II_repeat_euk 340 353
IPR000684 RNA_pol_II_repeat_euk 382 395
IPR000684 RNA_pol_II_repeat_euk 213 227
IPR000684 RNA_pol_II_repeat_euk 422 433
IPR000684 RNA_pol_II_repeat_euk 312 325
IPR000684 RNA_pol_II_repeat_euk 291 304
IPR007081 RNA_pol_Rpb1_5 2 91
No external refs found!