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  5. Solyc02g083570.3.1

Solyc02g083570.3.1


Description : conjugation E2 protein


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083570.3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00142370 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.04 Archaeplastida
AMTR_s00152p00021900 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.04 Archaeplastida
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.02 Archaeplastida
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.08 Archaeplastida
AT3G08700 UBC12 ubiquitin-conjugating enzyme 12 0.03 Archaeplastida
ss="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"> GSVIVT01024027001 No alias Protein degradation.peptide... 0.08 Archaeplastida
Pp3c24_130V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.03 Archaeplastida
Zm00001e009636_P001 No alias conjugation E2 protein 0.02 Archaeplastida
Zm00001e025244_P002 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e027992_P001 No alias conjugation E2 protein 0.03 Archaeplastida
Zm00001e033719_P001 No alias conjugation E2 protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!