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  5. Solyc02g084420.3.1

Solyc02g084420.3.1


Description : transcription factor (BBX-DBB)


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0004244 (LandPlants) Phylogenetic Tree(s): OG_05_0004244_tree ,
OG_06_0005339 (SeedPlants) Phylogenetic Tree(s): OG_06_0005339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g084420.3.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT4G38960 No alias B-box type zinc finger family protein 0.03 Archaeplastida
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
Gb_39727 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida
LOC_Os02g39360.1 No alias transcription factor (BBX-DBB) 0.02 Archaeplastida
Pp3c7_5280V3.1 No alias B-box type zinc finger family protein 0.02 Archaeplastida
Solyc01g110180.4.1 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida
Zm00001e034791_P001 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 3 42
IPR000315 Znf_B-box 51 84
No external refs found!