Solyc02g084730.3.1


Description : rRNA adenosine dimethylase (DIM1B)


Gene families : OG0002205 (Archaeplastida) Phylogenetic Tree(s): OG0002205_tree ,
OG_05_0002471 (LandPlants) Phylogenetic Tree(s): OG_05_0002471_tree ,
OG_06_0006350 (SeedPlants) Phylogenetic Tree(s): OG_06_0006350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g084730.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 Archaeplastida
LOC_Os07g32550.1 No alias rRNA adenosine dimethylase (DIM1B) 0.06 Archaeplastida
MA_107802g0010 No alias Ribosomal RNA small subunit methyltransferase... 0.04 Archaeplastida
Smo116036 No alias RNA processing.RNA modification.rRNA/tRNA... 0.05 Archaeplastida
Solyc01g100430.3.1 No alias rRNA adenosine dimethylase (DIM1A) 0.04 Archaeplastida
Zm00001e013790_P001 No alias rRNA adenosine dimethylase (DIM1A) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 57 272
No external refs found!