Solyc02g084760.3.1


Description : Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana (sp|q9fmm0|ubc18_arath : 257.0)


Gene families : OG0002269 (Archaeplastida) Phylogenetic Tree(s): OG0002269_tree ,
OG_05_0002124 (LandPlants) Phylogenetic Tree(s): OG_05_0002124_tree ,
OG_06_0002060 (SeedPlants) Phylogenetic Tree(s): OG_06_0002060_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g084760.3.1
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Gb_19350 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.02 Archaeplastida
Zm00001e003346_P001 No alias Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e017907_P001 No alias Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 19 154
No external refs found!