Solyc02g084760.3.1

Description : Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana (sp|q9fmm0|ubc18_arath : 257.0)

Gene families : OG0002269 (Archaeplastida) Phylogenetic Tree(s): OG0002269_tree ,
OG_05_0002124 (LandPlants) Phylogenetic Tree(s): OG_05_0002124_tree ,
OG_06_0002060 (SeedPlants) Phylogenetic Tree(s): OG_06_0002060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g084760.3.1
Cluster	HCCA: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method
Gb_19350	No alias	Probable ubiquitin-conjugating enzyme E2 16...	0.02	Archaeplastida
Zm00001e003346_P001	No alias	Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e017907_P001	No alias	Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001012	RNA polymerase II regulatory region DNA binding	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0032422	purine-rich negative regulatory element binding	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	19	154

External Links

No external refs found!