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  5. Solyc02g084990.3.1

Solyc02g084990.3.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g084990.3.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT1G02310 MAN1 Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Gb_04261 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.04 Archaeplastida
MA_69814g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.06 Archaeplastida
Pp3c4_28130V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Pp3c6_26420V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c6_5880V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Solyc11g012190.3.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.07 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 42 328
No external refs found!