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  5. Solyc02g085120.3.1

Solyc02g085120.3.1


Description : Laccase-11 OS=Arabidopsis thaliana (sp|q8vza1|lac11_arath : 824.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor(50.1.10 : 357.4)


Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree ,
OG_06_0000178 (SeedPlants) Phylogenetic Tree(s): OG_06_0000178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085120.3.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00051360 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.05 Archaeplastida
AMTR_s00029p00185120 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AMTR_s00045p00045490 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
AMTR_s00055p00189700 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
AMTR_s00055p00190270 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
AT2G29130 ATLAC2, LAC2 laccase 2 0.04 Archaeplastida
AT2G30210 LAC3 laccase 3 0.02 Archaeplastida
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.04 Archaeplastida
AT3G09220 LAC7 laccase 7 0.09 Archaeplastida
AT5G01190 LAC10 laccase 10 0.03 Archaeplastida
AT5G03260 LAC11 laccase 11 0.06 Archaeplastida
AT5G05390 LAC12 laccase 12 0.04 Archaeplastida
AT5G48100 TT10, LAC15, ATLAC15 Laccase/Diphenol oxidase family protein 0.02 Archaeplastida
AT5G58910 LAC16 laccase 16 0.03 Archaeplastida
AT5G60020 ATLAC17, LAC17 laccase 17 0.04 Archaeplastida
GSVIVT01012332001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01012343001 No alias Laccase-14 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01016372001 No alias Cell wall.lignin.monolignol conjugation and... 0.06 Archaeplastida
GSVIVT01016490001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01016512001 No alias Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
GSVIVT01018939001 No alias Laccase-11 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024795001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01025046001 No alias Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
GSVIVT01025077001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01032744001 No alias Laccase-12 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01034003001 No alias Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
GSVIVT01034137001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01034138001 No alias Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
GSVIVT01034139001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01034146001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
Gb_14614 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_33400 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_34469 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g61160.1 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os01g62480.1 No alias lignin laccase 0.02 Archaeplastida
LOC_Os01g62490.1 No alias lignin laccase 0.04 Archaeplastida
LOC_Os03g16610.1 No alias lignin laccase 0.05 Archaeplastida
LOC_Os11g01730.1 No alias Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os11g47390.1 No alias Laccase-21 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10428927g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10434084g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_118833g0010 No alias lignin laccase 0.04 Archaeplastida
MA_122769g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_136989g0010 No alias Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.05 Archaeplastida
MA_14240g0010 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_205016g0010 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_57140g0020 No alias Laccase-12 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_63042g0010 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_66348g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_897132g0010 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Smo105894 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo80214 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Smo95740 No alias Laccase-13 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc05g043360.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.05 Archaeplastida
Solyc06g048860.3.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.06 Archaeplastida
Solyc06g050530.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc06g082240.2.1 No alias Laccase-3 OS=Arabidopsis thaliana (sp|q56yt0|lac3_arath... 0.03 Archaeplastida
Solyc09g010990.3.1 No alias lignin laccase 0.03 Archaeplastida
Zm00001e001354_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e015854_P001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e019303_P001 No alias lignin laccase 0.06 Archaeplastida
Zm00001e019316_P001 No alias lignin laccase 0.04 Archaeplastida
Zm00001e019412_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e023886_P001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e028767_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e028830_P002 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e031826_P001 No alias lignin laccase 0.05 Archaeplastida
Zm00001e039529_P002 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 34 147
IPR011706 Cu-oxidase_2 409 541
IPR001117 Cu-oxidase 161 309
No external refs found!