Solyc02g085190.2.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000264 (SeedPlants) Phylogenetic Tree(s): OG_06_0000264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085190.2.1
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00112210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G45050 GATA2 GATA transcription factor 2 0.04 Archaeplastida
AT3G60530 GATA4 GATA transcription factor 4 0.03 Archaeplastida
AT4G34680 GATA3 GATA transcription factor 3 0.03 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.03 Archaeplastida
AT5G49300 GATA16 GATA transcription factor 16 0.03 Archaeplastida
Cre06.g266850 No alias No description available 0.02 Archaeplastida
GSVIVT01018951001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_24250 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os01g47360.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os01g74540.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os04g45650.2 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os05g49280.1 No alias transcription factor (GATA) 0.06 Archaeplastida
LOC_Os05g50270.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os09g08150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g40810.1 No alias transcription factor (GATA) 0.05 Archaeplastida
MA_10434815g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_92522g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
Pp3c21_15110V3.1 No alias GATA transcription factor 19 0.03 Archaeplastida
Solyc05g056120.3.1 No alias transcription factor (GATA) 0.05 Archaeplastida
Zm00001e015260_P001 No alias transcription factor (GATA) 0.08 Archaeplastida
Zm00001e026601_P001 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e028245_P001 No alias transcription factor (GATA) 0.04 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e041332_P001 No alias transcription factor (GATA) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000679 Znf_GATA 131 165
No external refs found!