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  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00023p00058930

AMTR_s00023p00058930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.25

No description available


Gene families : OG0002517 (Archaeplastida) Phylogenetic Tree(s): OG0002517_tree ,
OG_05_0001659 (LandPlants) Phylogenetic Tree(s): OG_05_0001659_tree ,
OG_06_0000901 (SeedPlants) Phylogenetic Tree(s): OG_06_0000901_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00058930
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270120 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00022p00065900 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00023p00058900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00058970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00028p00157780 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00044p00014460 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AMTR_s00049p00013540 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00052p00172250 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00057p00140680 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00061p00190500 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00063p00188430 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00066p00195830 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00093p00053320 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00103p00134680 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00130p00118500 evm_27.TU.AmTr_v1... Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00144p00056560 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AMTR_s00154p00068320 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s01690p00009650 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!