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  5. Solyc02g085590.4.1

Solyc02g085590.4.1


Description : Vicilin-like seed storage protein At2g18540 OS=Arabidopsis thaliana (sp|f4iqk5|vcl21_arath : 345.0)


Gene families : OG0002434 (Archaeplastida) Phylogenetic Tree(s): OG0002434_tree ,
OG_05_0011414 (LandPlants) Phylogenetic Tree(s): OG_05_0011414_tree ,
OG_06_0011489 (SeedPlants) Phylogenetic Tree(s): OG_06_0011489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085590.4.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00089270 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g18540... 0.05 Archaeplastida
AT2G28490 No alias RmlC-like cupins superfamily protein 0.1 Archaeplastida
AT4G36700 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01019005001 No alias Vicilin-like seed storage protein At2g18540... 0.07 Archaeplastida
GSVIVT01025139001 No alias Vicilin-like seed storage protein At2g28490... 0.04 Archaeplastida
Gb_30035 No alias Vicilin-like seed storage protein At2g18540... 0.03 Archaeplastida
LOC_Os03g10110.1 No alias Vicilin-like seed storage protein At4g36700... 0.14 Archaeplastida
LOC_Os03g21790.1 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
MA_8072g0010 No alias Vicilin-like seed storage protein At2g28490... 0.06 Archaeplastida
Zm00001e001586_P001 No alias Vicilin-like seed storage protein At2g28490... 0.06 Archaeplastida
Zm00001e038790_P005 No alias Vicilin-like seed storage protein At2g18540... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 58 143
IPR006045 Cupin_1 253 403
No external refs found!