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  5. Solyc02g086660.4.1

Solyc02g086660.4.1


Description : ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris (sp|p46942|db10_nicsy : 780.0)


Gene families : OG0000695 (Archaeplastida) Phylogenetic Tree(s): OG0000695_tree ,
OG_05_0001582 (LandPlants) Phylogenetic Tree(s): OG_05_0001582_tree ,
OG_06_0001971 (SeedPlants) Phylogenetic Tree(s): OG_06_0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086660.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G14610 No alias DEAD box RNA helicase family protein 0.02 Archaeplastida
GSVIVT01016847001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
LOC_Os01g07740.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa... 0.01 Archaeplastida
MA_5118g0010 No alias ATP-dependent RNA helicase-like protein DB10... 0.03 Archaeplastida
Smo98552 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Solyc01g057760.4.1 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 383 492
IPR001202 WW_dom 21 51
IPR011545 DEAD/DEAH_box_helicase_dom 178 346
No external refs found!