Solyc02g086880.4.1

Description : Formate dehydrogenase, mitochondrial OS=Solanum tuberosum (sp|q07511|fdh_soltu : 691.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.17 oxidoreductase acting on CH or CH2 group(50.1.16 : 615.8)

Gene families : OG0004717 (Archaeplastida) Phylogenetic Tree(s): OG0004717_tree ,
OG_05_0005492 (LandPlants) Phylogenetic Tree(s): OG_05_0005492_tree ,
OG_06_0004997 (SeedPlants) Phylogenetic Tree(s): OG_06_0004997_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g086880.4.1
Cluster	HCCA: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00174910	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.17...	0.03	Archaeplastida
Pp3c16_11630V3.1	No alias	formate dehydrogenase	0.03	Archaeplastida
Zm00001e036982_P001	No alias	Formate dehydrogenase 1, mitochondrial OS=Oryza sativa...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005743	mitochondrial inner membrane	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006839	mitochondrial transport	IEP	Neighborhood
BP	GO:0006848	pyruvate transport	IEP	Neighborhood
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015718	monocarboxylic acid transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0098656	anion transmembrane transport	IEP	Neighborhood
BP	GO:1901475	pyruvate transmembrane transport	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903825	organic acid transmembrane transport	IEP	Neighborhood
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Neighborhood
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006140	D-isomer_DH_NAD-bd	112	290
IPR006139	D-isomer_2_OHA_DH_cat_dom	17	316

External Links

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Solyc02g086880.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation