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  5. Solyc02g087570.1.1

Solyc02g087570.1.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087570.1.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00187850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G72980 LBD7 LOB domain-containing protein 7 0.04 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 Archaeplastida
AT3G26620 LBD23 LOB domain-containing protein 23 0.02 Archaeplastida
AT3G47870 LBD27, SCP LOB domain-containing protein 27 0.03 Archaeplastida
GSVIVT01032592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c19_19400V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c19_19610V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 5 102
No external refs found!