Solyc02g088000.3.1


Description : starch synthase (SSII)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0002981 (LandPlants) Phylogenetic Tree(s): OG_05_0002981_tree ,
OG_06_0003717 (SeedPlants) Phylogenetic Tree(s): OG_06_0003717_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g088000.3.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT1G11720 ATSS3, SS3 starch synthase 3 0.04 Archaeplastida
Cre17.g721500 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
GSVIVT01011429001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
MA_10430152g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_675870g0010 No alias Soluble starch synthase 3, chloroplastic/amyloplastic... 0.02 Archaeplastida
Pp3c12_3220V3.1 No alias Glycogen/starch synthases, ADP-glucose type 0.02 Archaeplastida
Zm00001e006886_P001 No alias starch synthase (SSIII) 0.02 Archaeplastida
Zm00001e036436_P004 No alias starch synthase (SSI) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 278 520
IPR001296 Glyco_trans_1 579 722
No external refs found!