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  5. Solyc02g089020.2.1

Solyc02g089020.2.1


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g089020.2.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.03 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Gb_30049 No alias transcription factor (TCP) 0.04 Archaeplastida
Gb_36354 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.02 Archaeplastida
Gb_38379 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g24480.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_12784g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_35349g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_75780g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Pp3c7_5230V3.1 No alias No annotation 0.02 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e005407_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e019734_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e034097_P001 No alias transcription factor (TCP) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 47 109
No external refs found!