Description : COB cellulose microfibrils and hemicellulose interaction protein
Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0000657 (SeedPlants) Phylogenetic Tree(s): OG_06_0000657_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc02g089130.4.1 | |
Cluster | HCCA: Cluster_248 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00083860 | evm_27.TU.AmTr_v1... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | Archaeplastida | |
AMTR_s00047p00216570 | evm_27.TU.AmTr_v1... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.13 | Archaeplastida | |
AT1G09790 | COBL6 | COBRA-like protein 6 precursor | 0.04 | Archaeplastida | |
AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.16 | Archaeplastida | |
AT5G60920 | COB | COBRA-like extracellular glycosyl-phosphatidyl... | 0.04 | Archaeplastida | |
GSVIVT01008128001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | Archaeplastida | |
GSVIVT01008129001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.16 | Archaeplastida | |
GSVIVT01036565001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.14 | Archaeplastida | |
GSVIVT01036566001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | Archaeplastida | |
Gb_36719 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.08 | Archaeplastida | |
LOC_Os03g30250.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.15 | Archaeplastida | |
LOC_Os03g30260.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
LOC_Os03g54750.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | Archaeplastida | |
LOC_Os05g32110.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.1 | Archaeplastida | |
LOC_Os07g41320.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.1 | Archaeplastida | |
MA_106654g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
MA_4056g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | Archaeplastida | |
MA_40967g0020 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
MA_637485g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.09 | Archaeplastida | |
Mp7g06600.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | Archaeplastida | |
Pp3c20_16270V3.1 | No alias | COBRA-like extracellular glycosyl-phosphatidyl... | 0.04 | Archaeplastida | |
Pp3c2_9820V3.1 | No alias | COBRA-like protein 1 precursor | 0.03 | Archaeplastida | |
Smo271954 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.08 | Archaeplastida | |
Zm00001e005710_P002 | No alias | No annotation | 0.03 | Archaeplastida | |
Zm00001e012022_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | Archaeplastida | |
Zm00001e035505_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.19 | Archaeplastida | |
Zm00001e038043_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.13 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
CC | GO:0031225 | anchored component of membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
CC | GO:0005618 | cell wall | IEP | Neighborhood |
CC | GO:0005856 | cytoskeleton | IEP | Neighborhood |
CC | GO:0005885 | Arp2/3 protein complex | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
CC | GO:0015629 | actin cytoskeleton | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Neighborhood |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006918 | COBRA_pln | 45 | 208 |
No external refs found! |