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  5. Solyc02g089670.4.1

Solyc02g089670.4.1


Description : Protein trichome birefringence-like 19 OS=Arabidopsis thaliana (sp|q9lft0|tbl19_arath : 199.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0020348 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0001537 (SeedPlants) Phylogenetic Tree(s): OG_06_0001537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g089670.4.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00112880 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 Archaeplastida
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.05 Archaeplastida
GSVIVT01018511001 No alias Protein trichome birefringence-like 18 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g49660.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g16160.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
MA_10427759g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_23290V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Archaeplastida
Pp3c5_27060V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 239 317
IPR025846 PMR5_N_dom 186 238
No external refs found!