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  5. Solyc02g089830.2.1

Solyc02g089830.2.1


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g089830.2.1
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 Archaeplastida
GSVIVT01021167001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Gb_30049 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os08g33530.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_101752g0020 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_35349g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3891g0010 No alias transcription factor (TCP) 0.06 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 64 148
No external refs found!