Solyc02g089940.4.1

Description : transcription factor (BEL)

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0001991 (SeedPlants) Phylogenetic Tree(s): OG_06_0001991_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g089940.4.1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00243900	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00030p00173920	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AT1G19700	BEL10, BLH10	BEL1-like homeodomain 10	0.09	Archaeplastida
AT1G75410	BLH3	BEL1-like homeodomain 3	0.03	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.08	Archaeplastida
AT2G35940	EDA29, BLH1	BEL1-like homeodomain 1	0.04	Archaeplastida
AT4G32980	ATH1	homeobox gene 1	0.03	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.04	Archaeplastida
AT5G41410	BEL1	POX (plant homeobox) family protein	0.07	Archaeplastida
GSVIVT01009633001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01019043001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
GSVIVT01019399001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Gb_22513	No alias	transcription factor (BEL)	0.05	Archaeplastida
Gb_36166	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os12g06340.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
Solyc06g074120.3.1	No alias	transcription factor (BEL)	0.06	Archaeplastida
Solyc08g065420.3.1	No alias	transcription factor (BEL)	0.05	Archaeplastida
Solyc10g086640.3.1	No alias	transcription factor (BEL)	0.04	Archaeplastida
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e003327_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e024626_P004	No alias	transcription factor (BEL)	0.05	Archaeplastida
Zm00001e026923_P002	No alias	transcription factor (BEL)	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004514	nicotinate-nucleotide diphosphorylase (carboxylating) activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009435	NAD biosynthetic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019674	NAD metabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	515	554
IPR006563	POX_dom	321	445

External Links

No external refs found!

Solyc02g089940.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation