1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g090000.3.1

Solyc02g090000.3.1


Description : CASP-like protein 5C1 OS=Oryza sativa subsp. japonica (sp|q10ej2|csplu_orysj : 123.0)


Gene families : OG0000968 (Archaeplastida) Phylogenetic Tree(s): OG0000968_tree ,
OG_05_0010943 (LandPlants) Phylogenetic Tree(s): OG_05_0010943_tree ,
OG_06_0010903 (SeedPlants) Phylogenetic Tree(s): OG_06_0010903_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090000.3.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
MA_105791g0010 No alias CASP-like protein 5B1 OS=Ginkgo biloba... 0.02 Archaeplastida
MA_61526g0010 No alias CASP-like protein 5B1 (Fragment) OS=Picea sitchensis... 0.03 Archaeplastida
MA_73698g0010 No alias CASP-like protein 5A1 OS=Picea sitchensis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 10 137
No external refs found!