Solyc02g090220.3.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090220.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.04 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.03 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.03 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.09 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.01 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os05g36900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_939289g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.04 Archaeplastida
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Solyc03g082840.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.09 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019764_P001 No alias transcription factor (DOF) 0.01 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 22 77
No external refs found!